Basic Information
Locus ID:
gene-BS78_10G222700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 39321000 | 39322325 | - | gene-BS78_10G222700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 40,026.33 Da | 48.21 | 92.94 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 174 | 291 | 3.22628E-46 | - |
| Pfam | PF00651 | BTB/POZ domain | 179 | 291 | 3.6E-24 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 15 | 149 | 6.7E-9 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 167 | 291 | 8.63E-28 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 294 | 360 | 3.1E-18 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 17 | 148 | 3.5E-9 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 167 | 288 | 1.8E-34 | IPR011333 |
| SMART | SM00225 | BTB_4 | 188 | 294 | 8.7E-20 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 188 | 250 | 16.776148 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_039844400.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5ULY1 | BTB/POZ and MATH domain-containing protein 2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0025099 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology