Basic Information
Locus ID:
gene-BS78_10G222600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 39283765 | 39284823 | - | gene-BS78_10G222600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 38,612.53 Da | 41.01 | 83.92 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 15 | 139 | 7.11601E-12 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 171 | 281 | 1.4E-23 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 14 | 146 | 1.8E-15 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 162 | 285 | 1.26E-28 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 288 | 351 | 4.0E-19 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 159 | 283 | 9.8E-36 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 10 | 143 | 2.0E-16 | IPR008974 |
| SMART | SM00225 | BTB_4 | 180 | 288 | 7.0E-21 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 180 | 247 | 17.148424 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_025811393.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum hallii] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9DLS0 | BTB domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology