Basic Information
Locus ID:
gene-BS78_10G222500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 39281097 | 39284102 | + | gene-BS78_10G222500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 39,606.00 Da | 46.45 | 88.79 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 16 | 154 | 1.26282E-9 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 187 | 298 | 5.7E-27 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 14 | 158 | 5.07E-16 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 180 | 297 | 3.77E-30 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 14 | 157 | 7.5E-15 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 176 | 294 | 1.9E-35 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 299 | 362 | 3.8E-20 | - |
| SMART | SM00225 | BTB_4 | 196 | 299 | 1.6E-24 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 196 | 263 | 18.782301 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_039807890.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A194YLV0 | BTB domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3010G222100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology