Basic Information
Locus ID:
gene-BS78_10G222400
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 39276825 | 39277925 | - | gene-BS78_10G222400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 34,300.69 Da | 44.17 | 79.00 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 15 | 115 | 1.66627E-8 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 141 | 251 | 7.7E-25 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 12 | 115 | 5.89E-7 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 131 | 253 | 5.1E-30 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 8 | 116 | 1.5E-6 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 251 | 311 | 5.2E-12 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 128 | 250 | 2.5E-36 | IPR011333 |
| SMART | SM00225 | BTB_4 | 149 | 255 | 7.4E-24 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 149 | 216 | 16.672737 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_025811393.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum hallii] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A835E2Y0 | BTB domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_059151 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology