Basic Information
Locus ID:
gene-BS78_10G221900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 39255409 | 39258265 | - | gene-BS78_10G221900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 38,022.34 Da | 38.17 | 86.57 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 17 | 139 | 3.88308E-9 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 168 | 278 | 1.2E-24 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 11 | 141 | 2.78E-12 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 157 | 277 | 3.65E-30 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 153 | 275 | 4.6E-37 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 13 | 141 | 1.9E-12 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 279 | 347 | 1.6E-19 | - |
| SMART | SM00225 | BTB_4 | 176 | 280 | 3.3E-24 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 176 | 243 | 17.375925 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_039807887.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0TGQ8 | BTB domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG276022 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology