Basic Information
Locus ID:
gene-BS78_10G217800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 38899766 | 38904328 | - | gene-BS78_10G217800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 69,241.58 Da | 39.05 | 90.93 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 350 | 549 | 8.1E-25 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 76 | 1.6E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 351 | 620 | 4.63E-46 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 68 | 206 | 3.81E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 320 | 422 | 1.9E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 423 | 642 | 2.5E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 225 | 3.6E-38 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 106 | 129 | 61.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 155 | 179 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 130 | 154 | 1.2 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 347 | 651 | 25.121077 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 620 | 657 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31250.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025812780.1 | pollen receptor-like kinase 4 [Panicum hallii] | 0 |
| C0LGR9 | Probable LRR receptor-like serine/threonine-protein kinase At4g31250 OS=Arabidopsis thaliana OX=3702 GN=At4g31250 PE=1 SV=1 | 0 | |
| TrEMBL | A0A140GYK5 | Protein kinase domain-containing protein OS=Paspalum vaginatum OX=158149 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology