Basic Information
Locus ID:
gene-BS78_10G186200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 35910737 | 35914371 | - | gene-BS78_10G186200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.06 | 42,053.14 Da | 55.81 | 54.47 | -1.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 200 | 284 | 1.0E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 372 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 203 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 186 | - | - |
| Coils | Coil | Coil | 215 | 242 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.2 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_025811445.1 | protein WVD2-like 5 [Panicum hallii] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811S602 | TPX2 domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS60446 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology