Basic Information
Locus ID:
gene-BS78_10G185900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 35830764 | 35836035 | + | gene-BS78_10G185900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.20 | 72,881.63 Da | 45.97 | 88.76 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 331 | 625 | 1.44731E-122 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 300 | 611 | 6.6E-91 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 331 | 637 | 4.78E-69 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 335 | 630 | 1.4E-44 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 174 | - | - |
| Coils | Coil | Coil | 262 | 282 | - | - |
| Coils | Coil | Coil | 210 | 230 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_002444200.1 | probable galacturonosyltransferase 4 [Sorghum bicolor] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | C5YK73 | Hexosyltransferase OS=Sorghum bicolor OX=4558 GN=SORBI_3007G105700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology