Basic Information
Locus ID:
gene-BS78_10G180000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 35131963 | 35134191 | + | gene-BS78_10G180000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 39,834.44 Da | 54.53 | 74.21 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 170 | 215 | 1.3E-12 | IPR006652 |
| Pfam | PF00646 | F-box domain | 6 | 47 | 4.3E-4 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 132 | 167 | 5.9E-6 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 86 | 337 | 1.26E-39 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 73 | 301 | 1.2E-38 | IPR015915 |
| SMART | SM00612 | kelc_smart | 182 | 229 | 1.1E-4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 132 | 181 | 3.9E-7 | IPR006652 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 65 | 85 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_012700569.1 | LOW QUALITY PROTEIN: F-box/kelch-repeat protein At1g80440-like [Setaria italica] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A4U6V0M0 | F-box domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_4G238100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology