Basic Information
Locus ID:
gene-BS78_10G165300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 32236158 | 32239384 | + | gene-BS78_10G165300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.94 | 105,694.06 Da | 42.27 | 102.74 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 677 | 951 | 1.96833E-91 | - |
| Pfam | PF13855 | Leucine rich repeat | 217 | 277 | 6.2E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 94 | 130 | 1.7E-6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 362 | 383 | 0.7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 674 | 947 | 2.5E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 666 | 949 | 3.28E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 288 | 596 | 1.9E-34 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 74 | 366 | 2.04E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 208 | 8.7E-14 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 751 | 951 | 4.3E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 288 | 591 | 7.5E-66 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 145 | 2.2E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 209 | 287 | 7.1E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 666 | 750 | 1.4E-19 | - |
| SMART | SM00369 | LRR_typ_2 | 167 | 191 | 80.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 498 | 522 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 359 | 383 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 240 | 264 | 0.55 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 94 | 118 | 50.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 671 | 926 | 1.1E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 671 | 951 | 36.286938 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 799 | 811 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 677 | 701 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 97 | 110 | 2.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 240 | 253 | 2.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_052159478.1 | receptor-like protein kinase 5 [Oryza glaberrima] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811SAI8 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS63332 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology