Basic Information
Locus ID:
gene-BS78_10G165200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 32207619 | 32211424 | + | gene-BS78_10G165200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 111,852.08 Da | 36.99 | 97.31 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 701 | 983 | 4.00557E-94 | - |
| Pfam | PF13855 | Leucine rich repeat | 298 | 357 | 6.4E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 509 | 569 | 5.1E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 74 | 9.9E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 697 | 914 | 2.4E-40 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 81 | 432 | 7.69E-58 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 379 | 599 | 1.84E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 681 | 982 | 1.05E-71 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 152 | 388 | 1.4E-58 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 389 | 628 | 2.7E-48 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 151 | 2.5E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 678 | 784 | 2.8E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 785 | 1000 | 2.5E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 249 | 273 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 320 | 343 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 344 | 368 | 62.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 100 | 124 | 80.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 695 | 988 | 3.1E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 531 | 555 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 556 | 580 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 200 | 224 | 260.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 695 | 982 | 36.357609 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 701 | 734 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 833 | 845 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 556 | 569 | 6.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 103 | 116 | 6.2E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1007 | 1030 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_025811826.1 | receptor-like protein kinase 5 [Panicum hallii] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6PFC2 | Receptor-like protein kinase 5 OS=Panicum miliaceum OX=4540 GN=C2845_PM10G14480 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology