Basic Information
Locus ID:
gene-BS78_10G143800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
BTB And C-terminal Kelch
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 19736739 | 19742697 | - | gene-BS78_10G143800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 60,565.29 Da | 52.67 | 76.56 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 135 | 209 | 4.51395E-14 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 244 | 342 | 4.2E-8 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 128 | 223 | 1.3E-15 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 422 | 535 | 8.5E-5 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 136 | 223 | 3.06E-13 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 259 | 364 | 3.6E-12 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 96 | 258 | 3.3E-18 | IPR011333 |
| SMART | SM00875 | BACK_2 | 239 | 343 | 2.6E-4 | IPR011705 |
| SMART | SM00225 | BTB_4 | 128 | 226 | 9.1E-10 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 120 | 195 | 13.632483 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_002438463.1 | BTB/POZ domain-containing protein POB1 [Sorghum bicolor] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1E5UNU9 | BTB/POZ domain-containing protein POB1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0024431 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology