Basic Information
Locus ID:
gene-BS78_10G141800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 18463885 | 18464904 | + | gene-BS78_10G141800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 36,364.41 Da | 33.63 | 83.45 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 39 | 319 | 4.5E-60 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 36 | 321 | 7.82E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 32 | 127 | 2.4E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 128 | 330 | 1.1E-56 | - |
| SMART | SM00220 | serkin_6 | 39 | 319 | 9.3E-83 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 39 | 319 | 43.989967 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 157 | 169 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63370.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034594624.1 | putative cyclin-dependent kinase F-2 [Setaria viridis] | 0 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 0 | |
| TrEMBL | K3XPB4 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0140s00005.v1.0 |
| Poaceae | Echinochloa crus-galli | 9 | AH02.2037, AH03.435, AH04.1243, AH04.1246, AH04.1247 ... |
| Poaceae | Oryza coarctata | 1 | Oco02G013250 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g39350.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_10G141800 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr16G007020, Chr17G006410 |
| Poaceae | Zea mays | 1 | Zm00001eb169760_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-38582, nbis-gene-38583 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18813 |