Basic Information
Locus ID:
gene-BS78_10G131800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 15506415 | 15509782 | + | gene-BS78_10G131800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.94 | 59,306.60 Da | 30.08 | 109.26 | 0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 42 | 456 | 5.6E-57 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 158 | 210 | 2.6E-15 | - |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 111 | 125 | 2.1E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 126 | 134 | 2.1E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 97 | 108 | 2.1E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 166 | 176 | 2.1E-9 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55470.1 | Na+/H+ (sodium hydrogen) exchanger 3. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_039843237.1 | sodium/hydrogen exchanger 4-like isoform X1 [Panicum virgatum] | 0 |
| Q8S397 | Sodium/hydrogen exchanger 4 OS=Arabidopsis thaliana OX=3702 GN=NHX4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0TGW2 | Na_H_Exchanger domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4KG114200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology