Basic Information
Locus ID:
gene-BS78_10G120600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 12365491 | 12368259 | + | gene-BS78_10G120600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 73,346.54 Da | 44.30 | 87.50 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 36 | 268 | 9.0262E-81 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 367 | 635 | 3.3754E-96 | - |
| Pfam | PF00139 | Legume lectin domain | 45 | 271 | 3.8E-55 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 361 | 631 | 1.8E-48 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 36 | 268 | 1.35E-58 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 344 | 654 | 4.59E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 437 | 642 | 4.9E-61 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 35 | 287 | 2.9E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 323 | 436 | 4.0E-27 | - |
| SMART | SM00220 | serkin_6 | 361 | 626 | 2.7E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 361 | 649 | 37.120842 | IPR000719 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 150 | 156 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 480 | 492 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 367 | 390 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_025812514.1 | probable L-type lectin-domain containing receptor kinase S.7 [Panicum hallii] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1E5W3V2 | Putative L-type lectin-domain containing receptor kinase S.7 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0006930 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology