halophFGD

Basic Information

Locus ID: gene-BS78_10G106800

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: Speckle-type POZ protein-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	9482358	9484851	-	gene-BS78_10G106800

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.23	41,140.14 Da	44.55	92.45	-0.08

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00121	MATH	39	148	2.40297E-4	IPR002083
CDD	cd18280	BTB_POZ_BPM_plant	175	293	6.17433E-47	-
Pfam	PF00651	BTB/POZ domain	176	293	4.5E-25	IPR000210
SUPERFAMILY	SSF54695	POZ domain	165	293	8.63E-31	IPR011333
SUPERFAMILY	SSF49599	TRAF domain-like	17	153	1.1E-9	-
Gene3D	G3DSA:1.25.40.420	-	297	362	2.0E-15	-
Gene3D	G3DSA:2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	17	152	4.1E-9	IPR008974
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	164	291	1.8E-35	IPR011333
SMART	SM00225	BTB_4	186	296	2.9E-21	IPR000210
ProSiteProfiles	PS50097	BTB domain profile.	186	247	18.24457	IPR000210

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G39760.1	BTB/POZ/MATH-domains containing protein.
RefSeq	XP_015641081.1	BTB/POZ and MATH domain-containing protein 1 [Oryza sativa Japonica Group]
Swiss-Prot	O22286	BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1
TrEMBL	A0A811SDE1	BTB domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS63739 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	5	AH06.2612, BH06.2420, BH06.2421, BH06.2422, CH06.2709
Poaceae	Eleusine coracana subsp. coracana	12	gene-QOZ80_5AG0391060, gene-QOZ80_6AG0515720 ... gene-QOZ80_6AG0547660, gene-QOZ80_6AG0547680, gene-QOZ80_6AG0547700, gene-QOZ80_6AG0547710, gene-QOZ80_6BG0501300, gene-QOZ80_6BG0501320, gene-QOZ80_6BG0501340, gene-QOZ80_6BG0501350, gene-QOZ80_6BG0501360, gene-QOZ80_7AG0564860
Poaceae	Hordeum vulgare	9	HORVU.MOREX.r3.7HG0724460.1.CDS1 ... HORVU.MOREX.r3.7HG0724690.1.CDS1, HORVU.MOREX.r3.7HG0736960.1.CDS1, HORVU.MOREX.r3.7HG0737010.1.CDS1, HORVU.MOREX.r3.7HG0737030.1.CDS1, HORVU.MOREX.r3.7HG0737070.1.CDS1, HORVU.MOREX.r3.7HG0737090.1.CDS1, HORVU.MOREX.r3.7HG0737240.1.CDS1, HORVU.MOREX.r3.7HG0737300.1.CDS1
Poaceae	Lolium multiflorum	19	gene-QYE76_001932, gene-QYE76_001934, gene-QYE76_001937 ... gene-QYE76_014272, gene-QYE76_020497, gene-QYE76_034670, gene-QYE76_034671, gene-QYE76_034695, gene-QYE76_036220, gene-QYE76_036221, gene-QYE76_036227, gene-QYE76_036232, gene-QYE76_036233, gene-QYE76_036234, gene-QYE76_036240, gene-QYE76_036248, gene-QYE76_036249, gene-QYE76_036250, gene-QYE76_036252
Poaceae	Oryza coarctata	4	Oco11G006600, Oco11G014910, Oco12G015040, Oco12G015070
Poaceae	Oryza sativa	5	LOC_Os06g14060.1, LOC_Os06g45720.1, LOC_Os06g45730.1 ... LOC_Os06g45790.1, LOC_Os08g09830.1
Poaceae	Paspalum vaginatum	7	gene-BS78_10G106800, gene-BS78_10G221900 ... gene-BS78_10G222400, gene-BS78_10G222500, gene-BS78_10G222600, gene-BS78_10G222700, gene-BS78_10G222800
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0103206, Pt_Chr0103207, Pt_Chr0103208, Pt_Chr0401303
Poaceae	Sporobolus alterniflorus	4	Chr10G019930, Chr10G019940, Chr11G002710, Chr27G005970
Poaceae	Thinopyrum elongatum	12	Tel7E01G682200, Tel7E01G797600, Tel7E01G799300 ... Tel7E01G799900, Tel7E01G800000, Tel7E01G800200, Tel7E01G800300, Tel7E01G800400, Tel7E01G800500, Tel7E01G800700, Tel7E01G801600, Tel7E01G803200
Poaceae	Triticum dicoccoides	19	gene_TRIDC7AG055940, gene_TRIDC7AG065750 ... gene_TRIDC7AG065900, gene_TRIDC7AG065940, gene_TRIDC7AG065960, gene_TRIDC7AG065990, gene_TRIDC7AG066010, gene_TRIDC7AG066030, gene_TRIDC7AG066050, gene_TRIDC7AG066110, gene_TRIDC7BG059400, gene_TRIDC7BG059460, gene_TRIDC7BG059480, gene_TRIDC7BG059490, gene_TRIDC7BG059500, gene_TRIDC7BG059530, gene_TRIDC7BG059710, gene_TRIDC7BG059730, gene_TRIDC7BG059750
Poaceae	Triticum aestivum	36	TraesCS7A02G401800.1.cds1, TraesCS7A02G471200.1.cds1 ... TraesCS7A02G471400.1.cds1, TraesCS7A02G471800.1.cds1, TraesCS7A02G471900.1.cds1, TraesCS7A02G472000.1.cds1, TraesCS7A02G472200.1.cds1, TraesCS7A02G472400.1, TraesCS7A02G472500.1, TraesCS7A02G472800.1.cds1, TraesCS7A02G473100.1, TraesCS7A02G473500.1.cds1, TraesCS7A02G474300.1.cds1, TraesCS7A02G474500.1.cds1, TraesCS7B02G373200.1.cds1, TraesCS7B02G373600.1.cds1, TraesCS7B02G373700.1.cds1, TraesCS7B02G373800.1, TraesCS7B02G373900.2, TraesCS7B02G374000.1.cds1, TraesCS7B02G374200.1, TraesCS7B02G375000.1, TraesCS7B02G375700.1.cds1, TraesCS7B02G375800.1.cds1, TraesCS7B02G376100.1.cds1, TraesCS7D02G395400.1, TraesCS7D02G458600.1.cds1, TraesCS7D02G459200.1.cds1, TraesCS7D02G459300.1.cds1, TraesCS7D02G459400.1.cds1, TraesCS7D02G459500.1.cds1, TraesCS7D02G459600.1, TraesCS7D02G459700.1.cds1, TraesCS7D02G459800.1.cds1, TraesCS7D02G460100.1.cds1, TraesCS7D02G461300.1.cds1
Poaceae	Zea mays	8	Zm00001eb274280_P004, Zm00001eb274300_P001 ... Zm00001eb274310_P001, Zm00001eb274320_P001, Zm00001eb305500_P001, Zm00001eb306050_P002, Zm00001eb389910_P001, Zm00001eb409490_P001
Poaceae	Zoysia japonica	3	nbis-gene-40524, nbis-gene-40525, nbis-gene-43180
Poaceae	Zoysia macrostachya	3	Zma_g29449, Zma_g33228, Zma_g33229