Basic Information
Locus ID:
gene-BS78_10G093800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 7911470 | 7914824 | + | gene-BS78_10G093800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.23 | 12,855.68 Da | 70.64 | 83.31 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 8 | 95 | 1.83081E-45 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 7 | 116 | 2.5E-43 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 5 | 96 | 6.68E-28 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 101 | 1.1E-42 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 118 | 2.1E-51 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 8 | 76 | 9.569498 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 118 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G22050.1 | membrane-anchored ubiquitin-fold protein 6 precursor. | 0 |
| RefSeq | XP_002436738.1 | membrane-anchored ubiquitin-fold protein 3 [Sorghum bicolor] | 0 |
| Q6Z8K4 | Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1 | 0 | |
| TrEMBL | C5Z710 | Membrane-anchored ubiquitin-fold protein OS=Sorghum bicolor OX=4558 GN=SORBI_3010G090900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology