Basic Information
Locus ID:
gene-BS78_10G026300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 1955264 | 1959434 | + | gene-BS78_10G026300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 72,281.92 Da | 43.18 | 94.50 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 415 | 675 | 1.40644E-86 | - |
| Pfam | PF13855 | Leucine rich repeat | 142 | 202 | 4.1E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 67 | 3.2E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 413 | 675 | 7.8E-36 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 235 | 4.16E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 394 | 675 | 3.99E-53 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 141 | 4.8E-24 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 490 | 677 | 1.3E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 142 | 256 | 3.3E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 388 | 487 | 7.9E-26 | - |
| SMART | SM00369 | LRR_typ_2 | 141 | 165 | 5.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 189 | 213 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 37.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 409 | 677 | 28.329496 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_004964453.1 | probable leucine-rich repeat receptor-like protein kinase At5g63930 [Setaria italica] | 0 |
| Q9LS95 | Putative proline-rich receptor-like protein kinase PERK6 OS=Arabidopsis thaliana OX=3702 GN=PERK6 PE=2 SV=2 | 0 | |
| TrEMBL | K3XVP1 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101765667 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology