Basic Information
Locus ID:
gene-BS78_09G246900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 43158029 | 43161633 | - | gene-BS78_09G246900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 41,521.19 Da | 41.87 | 81.24 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 74 | 342 | 1.23904E-114 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 71 | 342 | 5.3E-64 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 49 | 342 | 1.09E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 168 | 353 | 1.2E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 57 | 151 | 5.9E-19 | - |
| SMART | SM00220 | serkin_6 | 68 | 345 | 2.8E-62 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 68 | 345 | 41.233837 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 209 | 221 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 203 | 221 | 4.5E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 165 | 178 | 4.5E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 313 | 335 | 4.5E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 269 | 291 | 4.5E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 59 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01490.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_002441568.1 | serine/threonine-protein kinase STY8 [Sorghum bicolor] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811RKX7 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS54389 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology