HalophFGD

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Basic Information
Locus ID: gene-BS78_09G241400
Species & Taxonomic ID: Paspalum vaginatum & 158149
Genome Assembly: GCA_026573395.1
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
chr9 42735459 42736649 - gene-BS78_09G241400
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.30 45,520.08 Da 51.97 92.80 -0.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 3 31 1.9E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 3 127 1.22E-11 IPR036047
Gene3D G3DSA:1.20.1280.50 - 1 49 1.3E-7 -
SMART SM00256 fbox_2 1 41 8.3E-4 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G49610.1 F-box family protein. 0
RefSeq XP_002467075.2 F-box protein At5g65850 [Sorghum bicolor] 0
Swiss-Prot Q9FGY4 F-box protein At5g49610 OS=Arabidopsis thaliana OX=3702 GN=At5g49610 PE=1 SV=1 0
TrEMBL A0A1Z5S6S7 F-box domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3001G218701 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Apiaceae Apium graveolens 1 AgUnG00432
Arecaceae Cocos nucifera 1 COCNU_07G015430
Asparagaceae Asparagus officinalis 1 AsparagusV1_10.95.V1.1
Poaceae Echinochloa crus-galli 56 AH01.3037, AH01.3921, AH01.3922, AH01.3924, AH03.3993 ...
AH03.3994, AH05.1009, AH05.1333, AH05.1336, AH05.1338, AH05.3392, AH06.2696, AH08.659, BH01.3380, BH01.4258, BH01.4264, BH01.4265, BH01.4267, BH01.4268, BH01.4269, BH03.4319, BH03.4320, BH03.4322, BH03.4323, BH05.1056, BH05.1058, BH05.1182, BH05.1392, BH05.1393, BH05.1506, BH05.1508, BH06.1844, BH06.2146, BH07.1269, BH07.1271, BH07.1272, BH09.364, BH09.370, CH01.2639, CH01.3621, CH01.4550, CH01.4556, CH01.4558, CH03.4556, CH05.1209, CH05.1527, CH05.1559, CH05.1560, CH05.1562, CH05.1709, CH05.1728, CH06.2372, CH07.190, CH07.192, CH07.193, CH08.118
Poaceae Eleusine coracana subsp. coracana 40 gene-QOZ80_2AG0108950, gene-QOZ80_2AG0109040 ...
gene-QOZ80_2AG0109050, gene-QOZ80_2AG0109070, gene-QOZ80_2AG0133370, gene-QOZ80_2AG0137250, gene-QOZ80_2BG0162470, gene-QOZ80_2BG0162550, gene-QOZ80_2BG0162560, gene-QOZ80_2BG0187190, gene-QOZ80_2BG0188910, gene-QOZ80_2BG0192850, gene-QOZ80_3AG0245010, gene-QOZ80_3AG0245020, gene-QOZ80_3AG0245050, gene-QOZ80_3AG0245060, gene-QOZ80_3BG0283030, gene-QOZ80_3BG0283040, gene-QOZ80_3BG0283080, gene-QOZ80_3BG0294580, gene-QOZ80_4AG0316850, gene-QOZ80_4AG0325830, gene-QOZ80_4BG0353850, gene-QOZ80_5AG0361210, gene-QOZ80_5BG0409810, gene-QOZ80_6AG0533080, gene-QOZ80_6AG0533130, gene-QOZ80_6AG0545430, gene-QOZ80_6BG0498920, gene-QOZ80_7AG0572490, gene-QOZ80_7AG0580690, gene-QOZ80_7AG0580700, gene-QOZ80_7BG0610270, gene-QOZ80_7BG0611860, gene-QOZ80_8AG0620430, gene-QOZ80_8AG0639010, gene-QOZ80_8BG0648180, gene-QOZ80_8BG0666830, gene-QOZ80_9BG0709340, gene-QOZ80_9BG0713800
Poaceae Hordeum vulgare 34 HORVU.MOREX.r3.1HG0008400.1.CDS1 ...
HORVU.MOREX.r3.2HG0210810.1.CDS1, HORVU.MOREX.r3.2HG0210820.1.CDS1, HORVU.MOREX.r3.2HG0210830.1.CDS1, HORVU.MOREX.r3.3HG0220950.1, HORVU.MOREX.r3.3HG0220980.1, HORVU.MOREX.r3.3HG0280880.1.CDS1, HORVU.MOREX.r3.3HG0301580.1.CDS1, HORVU.MOREX.r3.3HG0307870.1.CDS1, HORVU.MOREX.r3.3HG0315070.1.CDS1, HORVU.MOREX.r3.3HG0315150.1.CDS1, HORVU.MOREX.r3.3HG0315210.1.CDS1, HORVU.MOREX.r3.3HG0315220.1.CDS1, HORVU.MOREX.r3.3HG0315250.1.CDS1, HORVU.MOREX.r3.3HG0315420.1.CDS1, HORVU.MOREX.r3.3HG0315620.1.CDS1, HORVU.MOREX.r3.3HG0315900.1.CDS1, HORVU.MOREX.r3.3HG0317650.1.CDS1, HORVU.MOREX.r3.4HG0383460.1.CDS1, HORVU.MOREX.r3.4HG0393840.1.CDS1, HORVU.MOREX.r3.4HG0393850.1.CDS1, HORVU.MOREX.r3.4HG0402080.1.CDS1, HORVU.MOREX.r3.5HG0494930.1.CDS1, HORVU.MOREX.r3.6HG0539480.1.CDS1, HORVU.MOREX.r3.7HG0647760.1.CDS1, HORVU.MOREX.r3.7HG0706930.1.CDS1, HORVU.MOREX.r3.7HG0723480.1.CDS1, HORVU.MOREX.r3.7HG0737000.1.CDS1, HORVU.MOREX.r3.7HG0738720.1.CDS1, HORVU.MOREX.r3.7HG0742490.1.CDS1, HORVU.MOREX.r3.7HG0742550.1.CDS1, HORVU.MOREX.r3.7HG0742610.1.CDS1, HORVU.MOREX.r3.7HG0742810.1.CDS1, HORVU.MOREX.r3.7HG0751140.1.CDS1
Poaceae Lolium multiflorum 112 gene-QYE76_001033, gene-QYE76_006464, gene-QYE76_006626 ...
gene-QYE76_006921, gene-QYE76_007734, gene-QYE76_007735, gene-QYE76_009463, gene-QYE76_012704, gene-QYE76_012706, gene-QYE76_013575, gene-QYE76_013580, gene-QYE76_016722, gene-QYE76_018114, gene-QYE76_019989, gene-QYE76_019990, gene-QYE76_019991, gene-QYE76_019992, gene-QYE76_025774, gene-QYE76_025775, gene-QYE76_025790, gene-QYE76_025791, gene-QYE76_025792, gene-QYE76_025793, gene-QYE76_026009, gene-QYE76_026010, gene-QYE76_026011, gene-QYE76_026012, gene-QYE76_026013, gene-QYE76_026014, gene-QYE76_027348, gene-QYE76_033519, gene-QYE76_033557, gene-QYE76_035388, gene-QYE76_035427, gene-QYE76_035606, gene-QYE76_038125, gene-QYE76_038130, gene-QYE76_038141, gene-QYE76_038174, gene-QYE76_038206, gene-QYE76_038211, gene-QYE76_038212, gene-QYE76_038213, gene-QYE76_038899, gene-QYE76_038900, gene-QYE76_038901, gene-QYE76_038902, gene-QYE76_038903, gene-QYE76_038904, gene-QYE76_038905, gene-QYE76_038906, gene-QYE76_038907, gene-QYE76_038909, gene-QYE76_038911, gene-QYE76_038912, gene-QYE76_038913, gene-QYE76_038915, gene-QYE76_038942, gene-QYE76_038943, gene-QYE76_038952, gene-QYE76_046450, gene-QYE76_046557, gene-QYE76_049307, gene-QYE76_049581, gene-QYE76_049586, gene-QYE76_050379, gene-QYE76_050909, gene-QYE76_050911, gene-QYE76_050913, gene-QYE76_050923, gene-QYE76_050926, gene-QYE76_050929, gene-QYE76_050932, gene-QYE76_057528, gene-QYE76_057764, gene-QYE76_057767, gene-QYE76_057768, gene-QYE76_057771, gene-QYE76_057772, gene-QYE76_057773, gene-QYE76_057779, gene-QYE76_057785, gene-QYE76_058783, gene-QYE76_058874, gene-QYE76_058876, gene-QYE76_058879, gene-QYE76_058880, gene-QYE76_058881, gene-QYE76_058883, gene-QYE76_058884, gene-QYE76_058885, gene-QYE76_058894, gene-QYE76_058895, gene-QYE76_060827, gene-QYE76_065631, gene-QYE76_067867, gene-QYE76_068509, gene-QYE76_068514, gene-QYE76_068517, gene-QYE76_068529, gene-QYE76_068530, gene-QYE76_069804, gene-QYE76_069808, gene-QYE76_069809, gene-QYE76_069855, gene-QYE76_070009, gene-QYE76_070011, gene-QYE76_070013, gene-QYE76_070014, gene-QYE76_070015, gene-QYE76_070017, gene-QYE76_070642
Poaceae Oryza coarctata 20 Oco03G001720, Oco03G012060, Oco04G001590, Oco04G001650 ...
Oco04G012510, Oco05G013500, Oco06G012900, Oco07G001390, Oco07G001400, Oco08G001720, Oco08G001780, Oco09G017200, Oco10G017090, Oco13G003590, Oco13G015200, Oco14G016040, Oco15G008270, Oco20G003430, Oco22G000940, Oco24G000280
Poaceae Oryza sativa 18 LOC_Os02g03810.1, LOC_Os02g03910.1, LOC_Os02g03980.1 ...
LOC_Os02g04000.1, LOC_Os03g22750.1, LOC_Os04g11440.1, LOC_Os04g11450.1, LOC_Os04g11660.1, LOC_Os04g11790.1, LOC_Os04g11890.1, LOC_Os05g51100.1, LOC_Os07g47160.1, LOC_Os07g47170.1, LOC_Os10g03600.1, LOC_Os10g25210.1, LOC_Os11g03680.1, LOC_Os11g05680.1, LOC_Os12g03440.1
Poaceae Paspalum vaginatum 20 gene-BS78_01G050300, gene-BS78_01G372800, gene-BS78_K202900 ...
gene-BS78_02G063100, gene-BS78_02G342200, gene-BS78_02G382600, gene-BS78_04G117200, gene-BS78_04G117300, gene-BS78_06G029900, gene-BS78_06G030200, gene-BS78_06G032800, gene-BS78_06G060000, gene-BS78_06G281500, gene-BS78_08G141400, gene-BS78_08G141500, gene-BS78_09G241400, gene-BS78_09G256300, gene-BS78_10G001400, gene-BS78_10G059100, gene-BS78_10G197200
Poaceae Puccinellia tenuiflora 34 Pt_Chr0102584, Pt_Chr0103011, Pt_Chr0108085, Pt_Chr0204292 ...
Pt_Chr0206181, Pt_Chr0206281, Pt_Chr0206288, Pt_Chr0206595, Pt_Chr0206596, Pt_Chr0305472, Pt_Chr0305862, Pt_Chr0305863, Pt_Chr0305864, Pt_Chr0401485, Pt_Chr0401496, Pt_Chr0401497, Pt_Chr0401500, Pt_Chr0500125, Pt_Chr0500128, Pt_Chr0504581, Pt_Chr0506165, Pt_Chr0600736, Pt_Chr0600739, Pt_Chr0600746, Pt_Chr0600867, Pt_Chr0601035, Pt_Chr0601040, Pt_Chr0603524, Pt_Chr0605859, Pt_Chr0700131, Pt_Chr0700133, Pt_Chr0701243, Pt_Chr0701245, Pt_Ctg00019
Poaceae Sporobolus alterniflorus 28 Chr01G003480, Chr01G009240, Chr01G032510, Chr06G010500 ...
Chr07G002460, Chr09G014730, Chr10G018310, Chr11G004260, Chr11G010710, Chr12G007030, Chr12G007050, Chr12G035350, Chr12G035630, Chr13G010750, Chr15G012010, Chr16G005900, Chr17G005260, Chr17G008500, Chr18G000150, Chr19G000650, Chr22G014200, Chr23G017520, Chr24G012990, Chr24G013000, Chr25G014970, Chr26G002260, Chr27G016840, Chr27G016850
Poaceae Thinopyrum elongatum 42 Tel1E01G097100, Tel1E01G520300, Tel2E01G1022000 ...
Tel2E01G174700, Tel2E01G175200, Tel2E01G202200, Tel2E01G250700, Tel3E01G005200, Tel3E01G005300, Tel3E01G033200, Tel3E01G284100, Tel3E01G560000, Tel3E01G654900, Tel3E01G740000, Tel3E01G740600, Tel3E01G743700, Tel3E01G744200, Tel3E01G744300, Tel3E01G747400, Tel3E01G748200, Tel3E01G749700, Tel3E01G750600, Tel3E01G752700, Tel3E01G752800, Tel4E01G401200, Tel4E01G465200, Tel5E01G474400, Tel5E01G749500, Tel6E01G444800, Tel7E01G162500, Tel7E01G168700, Tel7E01G171100, Tel7E01G171200, Tel7E01G557300, Tel7E01G557400, Tel7E01G741800, Tel7E01G799100, Tel7E01G821900, Tel7E01G865700, Tel7E01G865900, Tel7E01G866400, Tel7E01G866500
Poaceae Triticum dicoccoides 11 gene_TRIDC1AG047770, gene_TRIDC1BG054040 ...
gene_TRIDC2AG010770, gene_TRIDC3AG058460, gene_TRIDC4AG060830, gene_TRIDC4AG060860, gene_TRIDC4AG060880, gene_TRIDC7AG045560, gene_TRIDC7AG045570, gene_TRIDC7AG045580, gene_TRIDC7BG037500
Poaceae Triticum aestivum 183 TraesCS1B02G020100.1.cds1, TraesCS1B02G046800.1.cds1 ...
TraesCS1B02G059300.1.cds1, TraesCS1B02G333500.1.cds1, TraesCS1D02G046600.1.cds1, TraesCS1D02G321000.1.cds1, TraesCS2A02G040400.1.cds1, TraesCS2A02G050200.1, TraesCS2A02G051300.1, TraesCS2A02G093500.1.cds1, TraesCS2A02G093600.1.cds1, TraesCS2B02G064000.1.cds1, TraesCS2B02G064100.1.cds1, TraesCS2B02G107900.1.cds1, TraesCS2B02G108100.1.cds1, TraesCS2B02G139700.1.cds1, TraesCS2D02G050400.1.cds1, TraesCS2D02G050500.1.cds1, TraesCS2D02G078200.1.cds1, TraesCS2D02G120600.1.cds1, TraesCS2D02G120700.1.cds1, TraesCS3A02G082000.1.cds1, TraesCS3A02G103200.1.cds1, TraesCS3A02G158900.1, TraesCS3A02G161500.1, TraesCS3A02G411300.1.cds1, TraesCS3A02G412300.1.cds1, TraesCS3A02G436300.1, TraesCS3A02G462600.1.cds1, TraesCS3A02G464500.1.cds1, TraesCS3A02G464900.1.cds1, TraesCS3A02G465200.1.cds1, TraesCS3A02G465500.1.cds1, TraesCS3A02G465900.1.cds1, TraesCS3A02G466000.1.cds1, TraesCS3A02G466300.1.cds1, TraesCS3A02G466600.1.cds1, TraesCS3A02G466900.1, TraesCS3A02G467400.1.cds1, TraesCS3A02G468700.1.cds1, TraesCS3A02G468800.1.cds1, TraesCS3A02G470300.1.cds1, TraesCS3A02G470400.1, TraesCS3A02G476800.1.cds1, TraesCS3A02G487100.1.cds1, TraesCS3A02G511900.1.cds1, TraesCS3B02G004400.1.cds1, TraesCS3B02G005700.1.cds1, TraesCS3B02G026500.1.cds1, TraesCS3B02G026600.1.cds1, TraesCS3B02G189900.1, TraesCS3B02G192800.1.cds1, TraesCS3B02G381900.1.cds1, TraesCS3B02G444400.1.cds1, TraesCS3B02G445900.1.cds1, TraesCS3B02G446000.1.cds1, TraesCS3B02G505700.1.cds1, TraesCS3B02G505800.1, TraesCS3B02G507900.1.cds1, TraesCS3B02G508000.1.cds1, TraesCS3B02G508200.1.cds1, TraesCS3B02G508300.1.cds1, TraesCS3B02G508900.1.cds1, TraesCS3B02G509200.1, TraesCS3B02G509500.1.cds1, TraesCS3B02G509800.1.cds1, TraesCS3B02G509900.1.cds1, TraesCS3B02G510000.1.cds1, TraesCS3B02G513000.1.cds1, TraesCS3B02G520600.1.cds1, TraesCS3B02G533400.1.cds1, TraesCS3B02G534100.1.cds1, TraesCS3D02G024000.1.cds1, TraesCS3D02G027000.1, TraesCS3D02G027100.1.cds1, TraesCS3D02G027200.1.cds1, TraesCS3D02G105600.1.cds1, TraesCS3D02G406600.1.cds1, TraesCS3D02G456700.1.cds1, TraesCS3D02G459200.1.cds1, TraesCS3D02G460500.1.cds1, TraesCS3D02G460700.1.cds1, TraesCS3D02G460900.1.cds1, TraesCS3D02G461100.1.cds1, TraesCS3D02G461300.1, TraesCS3D02G462400.1.cds1, TraesCS3D02G462500.1.cds1, TraesCS3D02G463100.1.cds1, TraesCS3D02G463400.1.cds1, TraesCS3D02G463500.1.cds1, TraesCS3D02G463900.1.cds1, TraesCS3D02G464000.1.cds1, TraesCS3D02G464500.1.cds1, TraesCS3D02G465200.1.cds1, TraesCS3D02G471300.1.cds1, TraesCS3D02G481100.1.cds1, TraesCS3D02G481500.1.cds1, TraesCS3D02G482400.1.cds1, TraesCS4A02G076500.1.cds1, TraesCS4A02G373400.1.cds1, TraesCS4A02G378500.1.cds1, TraesCS4A02G378700.1.cds1, TraesCS4A02G378900.1.cds1, TraesCS4A02G379000.1.cds1, TraesCS4A02G379200.1.cds1, TraesCS4A02G383600.1.cds1, TraesCS4B02G232400.1.cds1, TraesCS4B02G232500.1.cds1, TraesCS4B02G277300.1.cds1, TraesCS4D02G233700.1.cds1, TraesCS4D02G233800.1.cds1, TraesCS5A02G297600.1.cds1, TraesCS5A02G297800.1, TraesCS5B02G019200.1.cds1, TraesCS5B02G296800.1.cds1, TraesCS5D02G304600.1.cds1, TraesCS5D02G485600.1.cds1, TraesCS6A02G233000.1.cds1, TraesCS6B02G006300.1.cds1, TraesCS6B02G008000.1.cds1, TraesCS6B02G008500.1.cds1, TraesCS6B02G014600.1.cds1, TraesCS6D02G002100.1.cds1, TraesCS7A02G075300.1.cds1, TraesCS7A02G081600.1.cds1, TraesCS7A02G081700.1.cds1, TraesCS7A02G081800.1.cds1, TraesCS7A02G325100.1.cds1, TraesCS7A02G395500.1.cds1, TraesCS7A02G440700.1, TraesCS7A02G440800.1.cds1, TraesCS7A02G441000.1.cds1, TraesCS7A02G505400.1.cds1, TraesCS7A02G505500.1.cds1, TraesCS7A02G505600.1.cds1, TraesCS7A02G505700.1.cds1, TraesCS7A02G507000.1.cds1, TraesCS7B02G225800.1.cds1, TraesCS7B02G225900.1, TraesCS7B02G297400.1.cds1, TraesCS7B02G339400.1, TraesCS7B02G339500.1, TraesCS7B02G339600.1.cds1, TraesCS7B02G387700.1.cds1, TraesCS7B02G412800.1.cds1, TraesCS7B02G412900.1.cds1, TraesCS7B02G413000.1.cds1, TraesCS7B02G415200.1.cds1, TraesCS7D02G070800.1.cds1, TraesCS7D02G075100.1, TraesCS7D02G075300.1.cds1, TraesCS7D02G075400.1.cds1, TraesCS7D02G321700.1.cds1, TraesCS7D02G321800.1.cds1, TraesCS7D02G391000.1.cds1, TraesCS7D02G430200.1.cds1, TraesCS7D02G430500.1.cds1, TraesCS7D02G459100.1, TraesCS7D02G471500.1.cds1, TraesCS7D02G493200.1.cds1, TraesCS7D02G493300.1.cds1, TraesCS7D02G493400.1.cds1, TraesCS7D02G493500.1.cds1, TraesCS7D02G493600.1.cds1, TraesCS7D02G493700.1.cds1, TraesCSU02G009500.1.cds1, TraesCSU02G039500.1.cds1, TraesCSU02G051400.1, TraesCSU02G051500.1.cds1, TraesCSU02G051600.1.cds1, TraesCSU02G061900.1.cds1, TraesCSU02G062300.1.cds1, TraesCSU02G062400.1.cds1, TraesCSU02G163400.1, TraesCSU02G163500.1.cds1, TraesCSU02G172700.1, TraesCSU02G176400.1, TraesCSU02G185300.1.cds1, TraesCSU02G190900.1.cds1, TraesCSU02G195200.1.cds1, TraesCSU02G197300.1.cds1, TraesCSU02G228800.1.cds1, TraesCSU02G229900.1.cds1
Poaceae Zea mays 7 Zm00001eb014060_P001, Zm00001eb014070_P001 ...
Zm00001eb014080_P001, Zm00001eb031570_P001, Zm00001eb091000_P001, Zm00001eb157180_P001, Zm00001eb387810_P001
Poaceae Zoysia japonica 12 nbis-gene-1468, nbis-gene-1469, nbis-gene-1471 ...
nbis-gene-18852, nbis-gene-1893, nbis-gene-1894, nbis-gene-1900, nbis-gene-45755, nbis-gene-45756, nbis-gene-49191, nbis-gene-55221, nbis-gene-9992
Poaceae Zoysia macrostachya 6 Zma_g1141, Zma_g1397, Zma_g1398, Zma_g1399, Zma_g1402 ...
Zma_g18961
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