Basic Information
Locus ID:
gene-BS78_09G225900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Wall-associated receptor kinase C-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 41625778 | 41629865 | - | gene-BS78_09G225900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.99 | 44,714.32 Da | 40.82 | 77.11 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14380 | Wall-associated receptor kinase C-terminal | 183 | 262 | 1.6E-14 | IPR032872 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 42 | 115 | 8.5E-11 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 349 | 411 | 4.0E-10 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 325 | 411 | 5.27E-17 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 322 | 412 | 3.0E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 347 | 412 | 11.298026 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 353 | 375 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66910.2 | - | 0 |
| RefSeq | XP_015639092.1 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.1 isoform X2 [Oryza sativa Japonica Group] | 0 |
| F4HQ20 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.5 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-2.5 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8T0UTB0 | non-specific serine/threonine protein kinase OS=Panicum virgatum OX=38727 GN=PVAP13_3KG282227 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000035167 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103701919 |
| Asparagaceae | Asparagus officinalis | 4 | AsparagusV1_01.3235.V1.1, AsparagusV1_01.3237.V1.1 ... |
| Poaceae | Echinochloa crus-galli | 1 | AH05.1485 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_09G225900 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-24945 |