Basic Information
Locus ID:
gene-BS78_09G214000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Calcineurin B-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 40683725 | 40686501 | + | gene-BS78_09G214000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.83 | 24,006.80 Da | 51.32 | 80.95 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 112 | 179 | 1.42329E-9 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 109 | 177 | 2.3E-9 | IPR002048 |
| Pfam | PF13202 | EF hand | 74 | 95 | 3.6E-4 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 20 | 203 | 1.36E-43 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 18 | 211 | 1.2E-66 | - |
| SMART | SM00054 | efh_1 | 109 | 137 | 1.5 | IPR002048 |
| SMART | SM00054 | efh_1 | 153 | 181 | 0.2 | IPR002048 |
| SMART | SM00054 | efh_1 | 72 | 100 | 1.9 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 105 | 140 | 11.640179 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 68 | 103 | 12.281773 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 149 | 184 | 11.361225 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 162 | 174 | - | IPR018247 |
| PRINTS | PR00450 | Recoverin family signature | 76 | 97 | 5.0E-9 | - |
| PRINTS | PR00450 | Recoverin family signature | 169 | 189 | 5.0E-9 | - |
| PRINTS | PR00450 | Recoverin family signature | 123 | 141 | 5.0E-9 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04370 (VEGF signaling pathway)
map04370 (VEGF signaling pathway)
map04650 (Natural killer cell mediated cytotoxicity)
map04658 (Th1 and Th2 cell differentiation)
map04659 (Th17 cell differentiation)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24270.1 | Calcium-binding EF-hand family protein. encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium. | 0 |
| RefSeq | NP_001150076.1 | Calcineurin B-like protein 4 [Zea mays] | 0 |
| Q75KU4 | Calcineurin B-like protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL4 PE=1 SV=1 | 0 | |
| TrEMBL | B6TKT3 | Calcineurin B-like protein OS=Zea mays OX=4577 GN=100283705 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology