Basic Information
Locus ID:
gene-BS78_09G211600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 40554056 | 40555610 | + | gene-BS78_09G211600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 47,424.60 Da | 59.88 | 81.74 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 23 | 47 | 3.8E-5 | IPR001810 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 133 | 393 | 3.14E-5 | IPR011047 |
| SUPERFAMILY | SSF81383 | F-box domain | 23 | 81 | 2.22E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 17 | 68 | 3.8E-6 | - |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 134 | 363 | 1.3E-16 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43260.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_039841203.1 | F-box/LRR-repeat/kelch-repeat protein At1g09650-like [Panicum virgatum] | 0 |
| Q8S8Q9 | F-box/LRR-repeat protein At2g43260 OS=Arabidopsis thaliana OX=3702 GN=At2g43260 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0V0W2 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3KG479500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology