Basic Information
Locus ID:
gene-BS78_09G207700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 40195922 | 40200077 | - | gene-BS78_09G207700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 111,605.83 Da | 35.56 | 95.78 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 710 | 997 | 6.67819E-88 | - |
| Pfam | PF13855 | Leucine rich repeat | 155 | 213 | 1.0E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 708 | 993 | 3.0E-41 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 301 | 360 | 4.2E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 515 | 574 | 1.2E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 78 | 1.0E-4 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 704 | 1001 | 1.35E-69 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 305 | 607 | 3.92E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 77 | 370 | 1.02E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 470 | 640 | 7.0E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 297 | 469 | 1.2E-43 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 789 | 1019 | 1.9E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 688 | 788 | 2.5E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 192 | 8.9E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 296 | 1.2E-27 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 250 | 274 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 323 | 346 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 128 | 152 | 400.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 177 | 201 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 513 | 537 | 27.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 704 | 995 | 1.3E-28 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 347 | 371 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 561 | 585 | 27.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 704 | 1005 | 36.301071 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 847 | 859 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 710 | 738 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_025805251.1 | receptor-like protein kinase HSL1 [Panicum hallii] | 0 |
| F4I2N7 | Receptor-like protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=RLK7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3HAM9 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_3G208600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology