Basic Information
Locus ID:
gene-BS78_09G182300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 38215715 | 38224501 | - | gene-BS78_09G182300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 105,573.87 Da | 41.65 | 100.02 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 623 | 889 | 3.85702E-90 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 68 | 2.6E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 619 | 884 | 1.6E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 270 | 328 | 1.1E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 150 | 209 | 1.4E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 44 | 381 | 2.38E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 602 | 903 | 2.05E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 693 | 902 | 1.1E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 419 | 8.5E-14 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 587 | 692 | 7.9E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 182 | 2.7E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 183 | 288 | 3.4E-22 | IPR032675 |
| SMART | SM00220 | serkin_6 | 617 | 889 | 9.2E-44 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | 5.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 617 | 889 | 39.170273 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 737 | 749 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 623 | 645 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025809295.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Panicum hallii] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2S3HB33 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_3G238100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology