Basic Information
Locus ID:
gene-BS78_09G180500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 38085052 | 38091167 | + | gene-BS78_09G180500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 104,726.48 Da | 33.73 | 92.10 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 643 | 907 | 2.67841E-94 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 66 | 8.9E-6 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 641 | 905 | 1.4E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 618 | 910 | 1.16E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 396 | 2.82E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 396 | 4.4E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 189 | 7.2E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 713 | 918 | 3.4E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 609 | 712 | 2.1E-36 | - |
| SMART | SM00220 | serkin_6 | 637 | 910 | 2.5E-34 | IPR000719 |
| ProSiteProfiles | PS51318 | Twin arginine translocation (Tat) signal profile. | 1 | 34 | 7.741196 | IPR006311 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 268 | 290 | 7.511737 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 637 | 910 | 38.958263 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 756 | 768 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 643 | 665 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 931 | 955 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_039837810.1 | leucine-rich repeat receptor protein kinase HPCA1-like [Panicum virgatum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0UX76 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3KG376921 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology