Basic Information
Locus ID:
gene-BS78_09G173100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 37326407 | 37328890 | + | gene-BS78_09G173100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 64,784.24 Da | 30.33 | 90.46 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 46 | 207 | 2.24335E-91 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 405 | 587 | 7.54219E-90 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 450 | 575 | 9.5E-15 | IPR011766 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 43 | 210 | 2.0E-34 | IPR012001 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 240 | 354 | 3.8E-20 | IPR012000 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 43 | 215 | 2.4E-44 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 235 | 382 | 3.27E-30 | IPR029035 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 405 | 599 | 2.86E-43 | IPR029061 |
| Gene3D | G3DSA:3.40.50.1220 | - | 230 | 392 | 8.0E-40 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 41 | 216 | 1.1E-59 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 399 | 589 | 4.6E-57 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 37 | 599 | 3.2E-216 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_004961783.1 | pyruvate decarboxylase 1 [Setaria italica] | 0 |
| P28516 | Pyruvate decarboxylase 1 OS=Zea mays OX=4577 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | K3Z4P2 | pyruvate decarboxylase OS=Setaria italica OX=4555 GN=101757538 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology