halophFGD

Basic Information

Locus ID: gene-BS78_09G125900

Species & Taxonomic ID: Paspalum vaginatum & 158149

Genome Assembly: GCA_026573395.1

Description: Protein kinase domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr9	32269498	32272859	-	gene-BS78_09G125900

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.11	63,214.69 Da	46.45	89.62	-0.31

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	307	535	7.6E-23	IPR001245
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	1	199	2.5E-28	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	297	535	6.7E-40	IPR011009
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	1	206	5.93E-45	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	361	555	1.5E-29	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	267	360	4.7E-12	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	232	9.8E-49	-
SMART	SM00220	serkin_6	2	202	1.1E-6	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	202	26.986765	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	269	538	16.979895	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	50	62	-	IPR008271
Coils	Coil	Coil	528	548	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G21240.2	-
RefSeq	XP_002442737.1	wall-associated receptor kinase 4 isoform X2 [Sorghum bicolor]
Swiss-Prot	Q9LMN8	Wall-associated receptor kinase 3 OS=Arabidopsis thaliana OX=3702 GN=WAK3 PE=2 SV=2
TrEMBL	C5YR32	Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3008G022300 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	2	CH04.1869, CH05.2817
Poaceae	Eleusine coracana subsp. coracana	4	gene-QOZ80_5AG0375270, gene-QOZ80_9AG0685500 ... gene-QOZ80_9AG0685530, gene-QOZ80_9BG0711620
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.3HG0325550.1.CDS1
Poaceae	Oryza coarctata	1	Oco22G008390
Poaceae	Oryza sativa	8	LOC_Os10g02360.1, LOC_Os10g05250.1, LOC_Os10g05400.1 ... LOC_Os11g35120.1, LOC_Os11g35220.1, LOC_Os11g35260.1, LOC_Os11g35274.1, LOC_Os11g35290.1
Poaceae	Paspalum vaginatum	13	gene-BS78_05G166100, gene-BS78_05G166500, gene-BS78_K038600 ... gene-BS78_05G167000, gene-BS78_05G167200, gene-BS78_05G167600, gene-BS78_05G168000, gene-BS78_05G277300, gene-BS78_09G125900, gene-BS78_K039100, gene-BS78_K039400, gene-BS78_K039700, gene-BS78_K271300
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0600798
Poaceae	Sporobolus alterniflorus	6	Chr01G028150, Chr07G016140, Chr16G005860, Chr16G005880 ... Chr17G005230, Chr31G006720
Poaceae	Thinopyrum elongatum	2	Tel2E01G153000, Tel7E01G297400
Poaceae	Triticum dicoccoides	6	gene_TRIDC2BG007840, gene_TRIDC3AG072500 ... gene_TRIDC3BG083510, gene_TRIDC7AG017830, gene_TRIDC7AG017840, gene_TRIDC7BG007210
Poaceae	Triticum aestivum	5	TraesCS2B02G075200.1, TraesCS3B02G579200.1.cds1 ... TraesCS7A02G146300.1.cds1, TraesCS7B02G048900.1.cds1, TraesCS7D02G147900.1
Poaceae	Zea mays	3	Zm00001eb114030_P001, Zm00001eb114060_P001 ... Zm00001eb201880_P001
Poaceae	Zoysia japonica	1	nbis-gene-44241
Poaceae	Zoysia macrostachya	2	Zma_g18068, Zma_g18069