Basic Information
Locus ID:
gene-BS78_09G116200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 30593121 | 30594929 | + | gene-BS78_09G116200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.58 | 67,034.11 Da | 66.72 | 79.80 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 14 | 52 | 6.8E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 267 | 492 | 7.32E-14 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 53 | 1.7E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 260 | 559 | 1.9E-13 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 226 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58950.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_039840991.1 | uncharacterized protein LOC120700840 [Panicum virgatum] | 0 |
| TrEMBL | A0A3L6T0K2 | F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G22890 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology