Basic Information
Locus ID:
gene-BS78_09G080000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 10557821 | 10563768 | - | gene-BS78_09G080000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 103,073.57 Da | 35.35 | 95.40 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 609 | 876 | 6.56717E-93 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 62 | 2.2E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 607 | 872 | 5.2E-44 | IPR001245 |
| SUPERFAMILY | SSF52047 | RNI-like | 281 | 404 | 3.69E-9 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 298 | 2.21E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 589 | 895 | 3.28E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 282 | 417 | 4.6E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 183 | 1.3E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 281 | 5.8E-21 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 575 | 678 | 2.1E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 679 | 888 | 1.9E-53 | - |
| SMART | SM00220 | serkin_6 | 603 | 876 | 5.1E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 603 | 876 | 37.417656 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 723 | 735 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 609 | 631 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034587246.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Setaria viridis] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6VTH9 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_3G299800v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology