Basic Information
Locus ID:
gene-BS78_09G067400
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 7866975 | 7877414 | - | gene-BS78_09G067400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 69,244.90 Da | 35.62 | 98.88 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 313 | 582 | 1.08065E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 310 | 580 | 3.4E-37 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 76 | 6.2E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 288 | 580 | 4.1E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 201 | 2.83E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 384 | 598 | 8.4E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 218 | 2.4E-46 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 276 | 383 | 2.0E-34 | - |
| SMART | SM00220 | serkin_6 | 307 | 580 | 1.2E-27 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 152 | 174 | 7.288416 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 307 | 591 | 33.417736 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 313 | 335 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 430 | 442 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 150 | 163 | 2.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 129 | 142 | 2.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 0 |
| RefSeq | XP_023156689.1 | protein NSP-INTERACTING KINASE 3 isoform X2 [Zea mays] | 0 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7E8T0 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G127500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology