Basic Information
Locus ID:
gene-BS78_09G049100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 4893074 | 4897668 | + | gene-BS78_09G049100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.73 | 36,132.36 Da | 46.07 | 73.26 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 133 | 235 | 1.5E-11 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 24 | 95 | 2.2E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 257 | 2.25E-33 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 97 | 2.8E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 121 | 257 | 1.0E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 238 | 10.60546 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 279 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11350.1 | S-domain-1 13. | 0 |
| RefSeq | XP_022681567.1 | LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 1 [Setaria italica] | 0 |
| Q9LPZ9 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 OS=Arabidopsis thaliana OX=3702 GN=SD113 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1E5UNA8 | Putative receptor-like protein kinase OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0024630 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G084900, gene-BS78_09G049100 |