Basic Information
Locus ID:
gene-BS78_09G026700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 2440615 | 2443799 | + | gene-BS78_09G026700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 79,406.87 Da | 46.00 | 88.58 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 425 | 697 | 9.56311E-88 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 39 | 256 | 1.4092E-60 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 37 | 261 | 3.6E-40 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 421 | 634 | 2.5E-43 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 35 | 272 | 2.16E-49 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 403 | 724 | 1.64E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 505 | 716 | 7.5E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 379 | 504 | 3.0E-28 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 34 | 262 | 5.6E-54 | - |
| SMART | SM00220 | serkin_6 | 419 | 705 | 1.2E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 419 | 706 | 36.908833 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 549 | 561 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 425 | 448 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 743 | 775 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 743 | 763 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 324 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03140.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_004960359.1 | L-type lectin-domain containing receptor kinase VIII.2 [Setaria italica] | 0 |
| Q9LYX1 | L-type lectin-domain containing receptor kinase VIII.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK82 PE=2 SV=1 | 0 | |
| TrEMBL | K3Z446 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology