Basic Information
Locus ID:
gene-BS78_09G021100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein of unknown function (DUF2870)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 1917918 | 1922044 | + | gene-BS78_09G021100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.08 | 30,055.30 Da | 60.60 | 85.20 | -0.29 |
Protein Domain:
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004960305.1 | UPF0769 protein C21orf59 homolog [Setaria italica] | 0 |
| A0A1L8H579 | Cilia- and flagella-associated protein 298-B OS=Xenopus laevis OX=8355 GN=cfap298-b PE=3 SV=1 | 0 | |
| TrEMBL | K3ZA48 | Ubiquitin-like domain-containing protein OS=Setaria italica OX=4555 GN=101756581 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103721901 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.401.V1.1 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g15680 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0573s00001.v1.0 |
| Poaceae | Echinochloa crus-galli | 3 | AH05.951, BH05.846, CH05.969 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_5AG0407290, gene-QOZ80_5BG0455330 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0007690.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_008900 |
| Poaceae | Oryza coarctata | 2 | Oco09G000890, Oco10G001150 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g02970.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_09G021100 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0502238 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr12G023320 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G098700 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC1AG006220 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G046800.1, TraesCS1B02G060200.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb265980_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g27595 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g35200 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26062 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132640159 |
| Solanaceae | Solanum chilense | 1 | SOLCI000212600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107018876 |
| Zosteraceae | Zostera marina | 1 | Zosma02g21340.v3.1 |