Basic Information
Locus ID:
gene-BS78_08G162900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 29579552 | 29580342 | - | gene-BS78_08G162900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.05 | 18,392.65 Da | 44.62 | 83.04 | 0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 33 | 181 | 6.23564E-63 | - |
| Pfam | PF00314 | Thaumatin family | 37 | 140 | 6.7E-31 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 32 | 181 | 8.11E-47 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 31 | 181 | 1.3E-46 | IPR037176 |
| SMART | SM00205 | tha2 | 33 | 181 | 1.7E-27 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 158 | 1.4E-40 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 140 | 181 | 0.99 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 30 | 181 | 30.365789 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 171 | 180 | 5.7E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 122 | 138 | 5.7E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 32 | 44 | 5.7E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 52 | 61 | 5.7E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 73 | 84 | 5.7E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 85 | 114 | 5.7E-39 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_002443617.1 | thaumatin-like pathogenesis-related protein 4 [Sorghum bicolor] | 0 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6SR84 | Thaumatin-like protein OS=Panicum miliaceum OX=4540 GN=C2845_PM07G18710 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology