Basic Information
Locus ID:
gene-BS78_08G162600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 29564486 | 29565313 | - | gene-BS78_08G162600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.60 | 17,988.87 Da | 32.95 | 62.58 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 29 | 178 | 2.96955E-75 | - |
| Pfam | PF00314 | Thaumatin family | 33 | 137 | 1.9E-34 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 26 | 178 | 3.66E-57 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 149 | 178 | 2.4E-6 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 26 | 148 | 1.0E-47 | IPR037176 |
| SMART | SM00205 | tha2 | 29 | 178 | 1.0E-43 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 147 | 1.3E-47 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 147 | 178 | 3.2E-4 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 26 | 178 | 37.118256 | IPR001938 |
| ProSitePatterns | PS00316 | Thaumatin family signature. | 82 | 97 | - | IPR017949 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 28 | 40 | 1.1E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 119 | 135 | 1.1E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 70 | 81 | 1.1E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 168 | 177 | 1.1E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 48 | 57 | 1.1E-43 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 82 | 111 | 1.1E-43 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_008662351.1 | thaumatin-like protein [Zea mays] | 0 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 0 | |
| TrEMBL | B4FVM0 | Osmotin-like protein OSM34 OS=Zea mays OX=4577 GN=100284970 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology