Basic Information
Locus ID:
gene-BS78_08G154000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 28694362 | 28699646 | + | gene-BS78_08G154000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 113,434.72 Da | 45.79 | 81.35 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 626 | 915 | 2.60476E-174 | - |
| Pfam | PF00069 | Protein kinase domain | 620 | 910 | 1.3E-63 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 617 | 936 | 1.62E-90 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 618 | 938 | 1.1E-106 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 704 | 928 | 1.1E-106 | - |
| SMART | SM00220 | serkin_6 | 620 | 910 | 2.2E-106 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 911 | 1016 | 9.542413 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 620 | 910 | 51.636463 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 739 | 751 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 788 | 810 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 320 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62310.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. | 0 |
| RefSeq | XP_025807003.1 | probable serine/threonine protein kinase IRE [Panicum hallii] | 0 |
| Q9LE81 | Probable serine/threonine protein kinase IRE OS=Arabidopsis thaliana OX=3702 GN=IRE PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7EJF8 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G476400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology