Basic Information
Locus ID:
gene-BS78_08G148900
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 28214276 | 28217769 | + | gene-BS78_08G148900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 84,616.06 Da | 39.57 | 81.95 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 344 | 382 | 4.12436E-6 | - |
| Pfam | PF00069 | Protein kinase domain | 473 | 714 | 1.1E-24 | IPR000719 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 293 | 394 | 9.26E-5 | IPR009030 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 456 | 716 | 6.07E-56 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 442 | 534 | 3.2E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 535 | 735 | 2.2E-34 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 292 | 393 | 3.2E-9 | - |
| SMART | SM00220 | serkin_6 | 472 | 725 | 2.2E-13 | IPR000719 |
| SMART | SM00179 | egfca_6 | 344 | 393 | 7.8E-8 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 472 | 725 | 24.555717 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 344 | 377 | - | IPR018097 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 580 | 592 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 478 | 501 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_039802868.1 | wall-associated receptor kinase 2-like [Panicum virgatum] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0UMR0 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3NG279700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology