Basic Information
Locus ID:
gene-BS78_08G148600
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 28181407 | 28183666 | + | gene-BS78_08G148600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 70,074.89 Da | 32.49 | 83.98 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 231 | 269 | 1.89282E-5 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 362 | 629 | 8.8E-44 | IPR001245 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 228 | 280 | 8.38E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 629 | 1.78E-71 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 330 | 434 | 2.7E-30 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 194 | 233 | 5.3E-6 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 234 | 281 | 3.2E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 435 | 630 | 2.6E-47 | - |
| SMART | SM00179 | egfca_6 | 231 | 280 | 7.8E-7 | IPR001881 |
| SMART | SM00220 | serkin_6 | 359 | 627 | 1.2E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 359 | 630 | 35.24102 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 365 | 388 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 480 | 492 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 231 | 264 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_004963217.1 | wall-associated receptor kinase 2 [Setaria italica] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811RG61 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS52623 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology