Basic Information
Locus ID:
gene-BS78_08G148000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Wall-associated receptor kinase 5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 28155223 | 28158684 | + | gene-BS78_08G148000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 84,560.95 Da | 39.55 | 81.69 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 312 | 354 | 9.4912E-6 | - |
| Pfam | PF00069 | Protein kinase domain | 439 | 707 | 5.6E-45 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 40 | 104 | 2.1E-11 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 310 | 361 | 7.94E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 422 | 711 | 1.73E-74 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 260 | 360 | 1.8E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 515 | 731 | 1.7E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 412 | 514 | 1.1E-28 | - |
| SMART | SM00220 | serkin_6 | 439 | 712 | 1.8E-38 | IPR000719 |
| SMART | SM00181 | egf_5 | 315 | 361 | 0.08 | IPR000742 |
| SMART | SM00179 | egfca_6 | 312 | 361 | 3.2E-9 | IPR001881 |
| SMART | SM00181 | egf_5 | 262 | 311 | 54.0 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 439 | 712 | 36.428276 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 445 | 468 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 560 | 572 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 312 | 345 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21230.1 | wall associated kinase 5. encodes a wall-associated kinase | 0 |
| RefSeq | XP_034584042.1 | wall-associated receptor kinase 1-like [Setaria viridis] | 0 |
| Q9LMN7 | Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A368QNH3 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_3G393000v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology