HalophFGD

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Basic Information
Locus ID: gene-BS78_08G145600
Species & Taxonomic ID: Paspalum vaginatum & 158149
Genome Assembly: GCA_026573395.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr8 27930812 27932015 - gene-BS78_08G145600
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.14 40,775.75 Da 45.82 87.28 0.08
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 5 46 1.7E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 3 62 4.32E-11 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044370756.1 uncharacterized protein LOC123092955 [Triticum aestivum] 0
TrEMBL A0A835BI82 F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_039921 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 5 AH05.3855, AH05.3915, BH05.3927, CH05.4131, CH05.4136
Poaceae Eleusine coracana subsp. coracana 3 gene-QOZ80_4BG0348850, gene-QOZ80_5AG0395480 ...
gene-QOZ80_5BG0443800
Poaceae Paspalum vaginatum 3 gene-BS78_08G118600, gene-BS78_08G119600 ...
gene-BS78_08G145600
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.