Basic Information
Locus ID:
gene-BS78_08G139500
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Short Name:
HMT3
Description:
betaine-homocysteine S-methyltransferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 27380730 | 27384408 | + | gene-BS78_08G139500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.21 | 35,553.78 Da | 37.80 | 89.33 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 24 | 325 | 5.4E-78 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 20 | 327 | 4.58E-83 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 16 | 325 | 9.2E-104 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 279 | 328 | 0.34 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 1 | 206 | 4.2E-6 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 12 | 326 | 48.414955 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_039802803.1 | homocysteine S-methyltransferase 3 [Panicum virgatum] | 0 |
| Q9FUM8 | Homocysteine S-methyltransferase 3 OS=Zea mays OX=4577 GN=HMT-3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7EJ33 | Hcy-binding domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G466200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology