Basic Information
Locus ID:
gene-BS78_08G139300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Ulp1 protease family, C-terminal catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 27364060 | 27366233 | + | gene-BS78_08G139300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 23,245.44 Da | 78.08 | 50.42 | -0.90 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 153 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 126 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_020408527.1 | ubiquitin-like-specific protease 1D isoform X1 [Zea mays] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH08.185, BH06.1466, BH06.1764, CH06.1961, CH08.1556 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2BG0169550, gene-QOZ80_4BG0355250 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0693250.1.CDS1 |
| Poaceae | Oryza coarctata | 2 | Oco01G006970, Oco24G009650 |
| Poaceae | Oryza sativa | 6 | LOC_Os01g10770.1, LOC_Os05g27910.1, LOC_Os09g17180.1 ... |
| Poaceae | Paspalum vaginatum | 6 | gene-BS78_03G291000, gene-BS78_04G215100 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0703412 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr0G026040, Chr13G014470 |
| Poaceae | Thinopyrum elongatum | 2 | Tel7E01G496800, Tel7E01G887000 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC1AG015840, gene_TRIDC1BG046630 ... |
| Poaceae | Zea mays | 1 | Zm00001eb033680_P001 |