Basic Information
Locus ID:
gene-BS78_08G139200
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 27353408 | 27362231 | + | gene-BS78_08G139200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.22 | 100,161.55 Da | 49.74 | 69.26 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 69 | 341 | 1.77493E-109 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 64 | 341 | 5.5E-60 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 52 | 341 | 5.88E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 53 | 144 | 2.1E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 169 | 350 | 1.2E-60 | - |
| SMART | SM00220 | serkin_6 | 63 | 344 | 5.9E-62 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 63 | 344 | 42.110146 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 208 | 220 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 164 | 177 | 3.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 312 | 334 | 3.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 268 | 290 | 3.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 202 | 220 | 3.5E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 618 | 684 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 635 | 653 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 455 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | NP_001131428.2 | putative protein kinase superfamily protein [Zea mays] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811RAR4 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS50394 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | AH08.185, BH06.1466, BH06.1764, CH06.1961, CH08.1556 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2BG0169550, gene-QOZ80_4BG0355250 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0693250.1.CDS1 |
| Poaceae | Oryza coarctata | 2 | Oco01G006970, Oco24G009650 |
| Poaceae | Oryza sativa | 6 | LOC_Os01g10770.1, LOC_Os05g27910.1, LOC_Os09g17180.1 ... |
| Poaceae | Paspalum vaginatum | 6 | gene-BS78_03G291000, gene-BS78_04G215100 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0703412 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr0G026040, Chr13G014470 |
| Poaceae | Thinopyrum elongatum | 2 | Tel7E01G496800, Tel7E01G887000 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC1AG015840, gene_TRIDC1BG046630 ... |
| Poaceae | Zea mays | 1 | Zm00001eb033680_P001 |