Basic Information
Locus ID:
gene-BS78_08G139100
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 27344610 | 27348258 | + | gene-BS78_08G139100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 40,345.70 Da | 30.64 | 79.92 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 59 | 331 | 1.05173E-115 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 54 | 331 | 5.4E-61 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 42 | 331 | 2.73E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 43 | 135 | 6.4E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 159 | 340 | 5.7E-62 | - |
| SMART | SM00220 | serkin_6 | 53 | 334 | 1.1E-62 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 16 | 339 | 2.1E-54 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 53 | 334 | 42.23735 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 198 | 210 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 154 | 167 | 8.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 302 | 324 | 8.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 258 | 280 | 8.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 192 | 210 | 8.4E-16 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021302220.1 | serine/threonine-protein kinase HT1-like [Sorghum bicolor] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811RAR4 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS50394 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology