Basic Information
Locus ID:
gene-BS78_08G128700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 26309570 | 26315446 | + | gene-BS78_08G128700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 118,752.74 Da | 46.16 | 78.35 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 45 | 140 | 2.12078E-44 | - |
| CDD | cd13999 | STKc_MAP3K-like | 808 | 1065 | 5.33737E-113 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 804 | 1065 | 3.7E-64 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 58 | 141 | 8.9E-18 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 790 | 1064 | 6.29E-78 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 57 | 144 | 1.31E-19 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 60 | 143 | 9.1E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 890 | 1075 | 3.6E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 795 | 889 | 1.5E-25 | - |
| SMART | SM00220 | serkin_6 | 802 | 1071 | 7.5E-58 | IPR000719 |
| SMART | SM00666 | PB1_new | 56 | 143 | 2.5E-28 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 802 | 1072 | 42.110146 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 808 | 833 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 927 | 939 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 921 | 939 | 5.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1036 | 1058 | 5.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 884 | 897 | 5.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 992 | 1014 | 5.9E-14 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_002442438.2 | uncharacterized protein LOC8069730 isoform X1 [Sorghum bicolor] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811RGX1 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS52893 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology