Basic Information
Locus ID:
gene-BS78_08G126700
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 25978974 | 25980189 | + | gene-BS78_08G126700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.35 | 18,713.71 Da | 34.38 | 60.44 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 31 | 181 | 6.78776E-79 | - |
| Pfam | PF00314 | Thaumatin family | 35 | 140 | 5.9E-34 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 29 | 181 | 4.06E-59 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 28 | 152 | 4.3E-49 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 153 | 181 | 4.8E-6 | IPR037176 |
| SMART | SM00205 | tha2 | 31 | 181 | 9.5E-53 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 151 | 3.8E-47 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 150 | 181 | 0.0016 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 28 | 181 | 36.49382 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 50 | 59 | 7.9E-45 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 30 | 42 | 7.9E-45 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 171 | 180 | 7.9E-45 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 85 | 114 | 7.9E-45 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 122 | 138 | 7.9E-45 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 72 | 83 | 7.9E-45 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_025808117.1 | thaumatin-like protein [Panicum hallii] | 0 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7EJL6 | Thaumatin-like protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G479800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology