Basic Information
Locus ID:
gene-BS78_08G123300
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 25684146 | 25697177 | - | gene-BS78_08G123300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.97 | 303,336.19 Da | 53.47 | 94.86 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 66 | 397 | 3.2E-109 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 60 | 431 | 9.51E-119 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 56 | 409 | 1.9E-135 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 58 | 405 | 7.8E-165 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 60 | 397 | 122.088768 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 293 | 304 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 294 | 312 | 2.6E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 261 | 278 | 2.6E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 347 | 368 | 2.6E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 132 | 153 | 2.6E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2638 | 2668 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2635 | 2668 | - | - |
| Coils | Coil | Coil | 404 | 431 | - | - |
| Coils | Coil | Coil | 2002 | 2036 | - | - |
| Coils | Coil | Coil | 789 | 823 | - | - |
| Coils | Coil | Coil | 2598 | 2639 | - | - |
| Coils | Coil | Coil | 2516 | 2536 | - | - |
| Coils | Coil | Coil | 1388 | 1415 | - | - |
| Coils | Coil | Coil | 1583 | 1610 | - | - |
| Coils | Coil | Coil | 2327 | 2347 | - | - |
| Coils | Coil | Coil | 1776 | 1796 | - | - |
| Coils | Coil | Coil | 878 | 898 | - | - |
| Coils | Coil | Coil | 2263 | 2290 | - | - |
| Coils | Coil | Coil | 1300 | 1320 | - | - |
| Coils | Coil | Coil | 2099 | 2139 | - | - |
| Coils | Coil | Coil | 2402 | 2457 | - | - |
| Coils | Coil | Coil | 2465 | 2492 | - | - |
| Coils | Coil | Coil | 2231 | 2258 | - | - |
| Coils | Coil | Coil | 924 | 1000 | - | - |
| Coils | Coil | Coil | 1640 | 1667 | - | - |
| Coils | Coil | Coil | 2169 | 2196 | - | - |
| Coils | Coil | Coil | 673 | 700 | - | - |
| Coils | Coil | Coil | 1043 | 1063 | - | - |
| Coils | Coil | Coil | 1134 | 1186 | - | - |
| Coils | Coil | Coil | 604 | 631 | - | - |
| Coils | Coil | Coil | 488 | 522 | - | - |
| Coils | Coil | Coil | 2555 | 2575 | - | - |
| Coils | Coil | Coil | 1960 | 1994 | - | - |
| Coils | Coil | Coil | 2050 | 2080 | - | - |
| Coils | Coil | Coil | 2141 | 2161 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_012700443.1 | kinesin-like protein KIN-12F isoform X2 [Setaria italica] | 0 |
| B9GE13 | Kinesin-like protein KIN-12F OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12F PE=3 SV=1 | 0 | |
| TrEMBL | A0A368QPS9 | Kinesin motor domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_3G370700v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology