Basic Information
Locus ID:
gene-BS78_08G101800
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 23115720 | 23116274 | - | gene-BS78_08G101800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 14,808.85 Da | 38.88 | 90.77 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 1 | 107 | 6.6E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 107 | 1.78E-33 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 123 | 8.1E-35 | - |
| SMART | SM00219 | tyrkin_6 | 1 | 130 | 4.2E-4 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 130 | 20.470991 | IPR000719 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04490.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 36. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_025799993.1 | receptor-like serine/threonine-protein kinase SD1-8 [Panicum hallii] | 0 |
| Q9XEC6 | Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana OX=3702 GN=CRK36 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6W7X4 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_1G137850v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 2 | Sgl46099, Sgl50812 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000008753 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_08G101800 |