Basic Information
Locus ID:
gene-BS78_08G101000
Species & Taxonomic ID:
Paspalum vaginatum & 158149
Genome Assembly:
GCA_026573395.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 22970891 | 22980512 | - | gene-BS78_08G101000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.35 | 17,343.27 Da | 48.20 | 78.62 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01453 | D-mannose binding lectin | 62 | 159 | 1.8E-26 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 62 | 151 | 2.36E-18 | IPR036426 |
| Gene3D | G3DSA:2.90.10.30 | - | 43 | 154 | 3.0E-8 | - |
| SMART | SM00108 | blect_4 | 17 | 135 | 0.0016 | IPR001480 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 1 | 132 | 10.087772 | IPR001480 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 46 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11280.5 | - | 0 |
| RefSeq | XP_025799993.1 | receptor-like serine/threonine-protein kinase SD1-8 [Panicum hallii] | 0 |
| Q9SXB3 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11280 OS=Arabidopsis thaliana OX=3702 GN=At1g11280 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1E5UWE4 | Receptor-like serine/threonine-protein kinase SD1-8 (Fragment) OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0021784 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 32 | AH01.3355, AH02.1435, AH02.995, AH03.348, AH03.629, AH06.571 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_08G100300, gene-BS78_08G101000 |